Liquid Handling

Guide to Reaction Miniaturization: The Key to Next-Generation High-Throughput Workflows

Reaction miniaturization enhances workflows by reducing reagent waste, saving time and costs, and improving scalability and sustainability, transforming research and healthcare applications.


Reaction miniaturization is the process of scaling down assays to decrease the total assay volume while maintaining accurate and reliable results. It is gaining popularity over traditional workflows due to multiple benefits, including time-efficiency, cost-saving, and improving sustainability1,2. Reaction miniaturization is transforming research in many areas of research, such as drug discovery3 and diagnostics4. In this article, we will discuss challenges in traditional workflows that reaction miniaturization solves, the areas of life sciences reaction miniaturization is transforming, and what benefits miniaturization bestows.

Overcoming Challenges in Traditional Workflows Using Reaction Miniaturization

Traditional workflows experience numerous challenges, many of which can be solved through the incorporation of reaction miniaturization into workflows. Waste within labs is one such challenge. Scientific research often involves large amounts of waste due to workflow inefficiencies and single-use plastics. Workflow inefficiencies, such as the use of protocol-specified large volumes of reagent and high dead volumes, result in expensive reagents and precious samples being wasted5. Reaction miniaturization decreases the volume of reagent and sample required by up to a factor of 10, reducing waste and saving money6. Liquid handling automation also reduces reagent waste by decreasing the dead volume. Automation also helps to reduce single-use plastic wastage as it minimizes the use of pipette tips2

Further challenges arise from an increased likelihood of human error in traditional, manual workflows. Errors affect data validity and reproducibility, an increasingly common issue in science7. Reaction miniaturization requires liquid handling automation tools, such as DISPENDIX’s I.DOT Liquid Handler (Fig. 1), to accurately dispense the small reagent volumes. These systems remove the risk of human error and contribute to minimizing batch effects and maximizing reproducibility8,9. Reaction miniaturization also overcomes challenges associated with low throughout experiments by aiding scalability, reducing associated costs, optimizing efficiency, and, therefore, enabling high throughput experiments1

Figure 1. The I.DOT Liquid Handler can accurately dispense volumes as small as 4 nL, enabling assay miniaturization.

Read our dedicated article on the role of miniaturized reactions in modern laboratories to learn more about how reaction miniaturization is overcoming challenges.

Miniaturization in Life Sciences

Reaction miniaturization is now being applied to multiple areas of scientific research and healthcare. High-throughput screening of thousands of compounds is required for drug discovery. Traditional workflows have high costs associated with scaling up assays – large volumes of reagents are needed, and each test uses large volumes of the precious compound samples10. Reaction miniaturization enables scaling up drug screening by reducing reagent consumption and thereby reducing costs1

Genomics and proteomics are also using miniaturization to improve their workflows. Reaction miniaturization can be used in antibody-based reactions to increase assay sensitivity, even while decreasing sample volume11. DISPENDIX’s G.PREP NGS Automation technologies are enabling the miniaturization of next-generation sequencing (NGS), decreasing reagent volumes by as much as 1/10th of the manufacturer’s suggested volumes, and saving users a large amount of money. 

Reaction miniaturization is being used in synthetic biology to increase throughput by allowing multiple reactions to be carried out simultaneously so that multiple steps in DNA synthesis can be carried out on a single chip12

Diagnostics is another field reaction miniaturization is transforming. The reduction in sample and reagent volume not only enables the production of more cost-effective clinical diagnostic solutions but also increases the portability of diagnostic assays, improving point-of-care testing13. This is exemplified in the production of lab-on-a-chip technology, where miniaturized reactions are carried out on one small device14

Read our full article to learn more about the range of miniaturization applications in life sciences.

Benefits of Reaction Miniaturization

There are many benefits of reaction miniaturization over traditional workflows. The decrease in the volume of reagents required leads to vast cost-saving benefits. Reagents at up to 1/10th of the recommended volume can produce the same amount of high-quality data, so more experiments can be carried out with the same initial volume of reagent15,16. Combining reaction miniaturization with automation further increases the volume of reagent conserved as automation reduces the reagent dead volume. For example, DISPENDIX’s I.DOT Liquid Handler has a dead volume of only 1 μL. Reaction miniaturization also contributes to time-saving benefits, enabling parallel processing – where multiple reactions can be carried out simultaneously5

Lab sustainability can be boosted through the use of reaction miniaturization as fewer disposable plastics are required, and the use of automation can vastly decrease the number of pipette tips used (Fig. 2)2. In addition, decreased reagent input results in reductions in the amount of hazardous waste produced, further contributing to sustainability15. The cost-saving and time-saving benefits of reaction miniaturization also result in increased scalability and the ability to perform high-throughput experiments without a steep rise in costs and time1.

Figure 2. Scientific labs produce large amounts of plastic waste. (Source)

Read our dedicated article exploring miniaturized reaction benefits to learn more.

Conclusion

Reaction miniaturization is addressing key challenges in traditional experimental workflows, including reducing reagent waste, inefficiencies, and human error, to revolutionize workflows. Its vast range of applications across scientific fields, including drug discovery, genomics and proteomics, synthetic biology, and diagnostics, are having a transformative effect on research and healthcare. Reaction miniaturization offers many benefits, including reduced costs, time-savings, improved sustainability, and the ability to easily scale up experiments. The integration of automation, such as solutions provided by DISPENDIX, further boost accuracy, reproducibility, and high-throughput capabilities.

Ready to accelerate your research? 

Discover how DISPENDIX can enhance precision, efficiency, and reproducibility in your lab through our miniaturization technology. Download the I.DOT brochure or the G.PREP brochure and take the next step in transforming your workflows!

References

  1. Pereira SAP, Dyson PJ, Saraiva MLMFS. Miniaturized technologies for high-throughput drug screening enzymatic assays and diagnostics – A review. TrAC Trends Anal Chem. 2020;126:115862. doi:10.1016/j.trac.2020.115862
  2. Thakur A, Mukhopadhyay T, Ahirwar AK. Approaching sustainability in Laboratory Medicine. Clin Chem Lab Med CCLM. 2024;62(9):1787-1794. doi:10.1515/cclm-2023-0973
  3. Carstens C, Elbracht R, Gärtner C, Becker H. Opportunities and limits of cell-based assay miniaturization in drug discovery. Expert Opin Drug Discov. 2010;5(7):673-679. doi:10.1517/17460441.2010.488264
  4. Natalia A, Zhang L, Sundah NR, Zhang Y, Shao H. Analytical device miniaturization for the detection of circulating biomarkers. Nat Rev Bioeng. 2023;1(7):481-498. doi:10.1038/s44222-023-00050-8
  5. Silva TC, Eppink M, Ottens M. Automation and miniaturization: enabling tools for fast, high-throughput process development in integrated continuous biomanufacturing. J Chem Technol Biotechnol. 2022;97(9):2365-2375. doi:10.1002/jctb.6792
  6. Sauer S, Lange BMH, Gobom J, Nyarsik L, Seitz H, Lehrach H. Miniaturization in functional genomics and proteomics. Nat Rev Genet. 2005;6(6):465-476. doi:10.1038/nrg1618
  7. Baker M. 1,500 scientists lift the lid on reproducibility. Nature. 2016;533(7604):452-454. doi:10.1038/533452a
  8. Guan XL, Chang DPS, Mok ZX, Lee B. Assessing variations in manual pipetting: An under-investigated requirement of good laboratory practice. J Mass Spectrom Adv Clin Lab. 2023;30:25-29. doi:10.1016/j.jmsacl.2023.09.001
  9. Kushiro K, Carter M, Kinman J, Fox D, Madamba N, Strycharz J. Streamlining your miniaturized library prep with automation for high-throughput applications. J Biomol Tech JBT. 2020;31(Suppl):S11.
  10. De Stefano P, Bianchi E, Dubini G. The impact of microfluidics in high-throughput drug-screening applications. Biomicrofluidics. 2022;16(3):031501. doi:10.1063/5.0087294
  11. Zhang D, Dai W, Hu H, et al. Controlling the immobilization process of an optically enhanced protein microarray for highly reproducible immunoassay. Nanoscale. 2021;13(7):4269-4277. doi:10.1039/D0NR08407G
  12. Ma S, Tang N, Tian J. DNA Synthesis, Assembly and Applications in Synthetic Biology. Curr Opin Chem Biol. 2012;16(3-4):260-267. doi:10.1016/j.cbpa.2012.05.001
  13. Ahmad F, Hashsham SA. Miniaturized nucleic acid amplification systems for rapid and point-of-care diagnostics: A review. Anal Chim Acta. 2012;733:1-15. doi:10.1016/j.aca.2012.04.031
  14. Lee NY. Recent Progress in Lab-on-a-Chip Technology and Its Potential Application to Clinical Diagnoses. Int Neurourol J. 2013;17(1):2-10. doi:10.5213/inj.2013.17.1.2
  15. Gesmundo N, Dykstra K, Douthwaite JL, et al. Miniaturization of popular reactions from the medicinal chemists’ toolbox for ultrahigh-throughput experimentation. Nat Synth. 2023;2(11):1082-1091. doi:10.1038/s44160-023-00351-1
  16. Mildrum S, Hendricks A, Stortchevoi A, Kamelamela N, Butty VL, Levine SS. High-throughput Minitaturized RNA-Seq Library Preparation. J Biomol Tech JBT. 2020;31(4):151-156. doi:10.7171/jbt.20-3104-004

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